Function reference
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brapi_get_call()
- Internal Function Used for Core BrAPI GET Calls
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brapi_headers()
- Common HTTP Headers to Send
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build_pedigree_table()
- Building Pedigree Table Recursively
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calc_biovars()
- Calculate the Bioclimatic Variables
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debug_qbms()
- Debug Internal QBMS Status Object
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get_async_page()
- Async Version of HTTP GET Request
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get_async_pages()
- Run All Supplied Pages
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get_germplasm_attributes()
- Retrieve Attributes for a Specified Germplasm
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get_germplasm_data()
- Retrieve Observations Data for a Specified Germplasm.
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get_germplasm_id()
- Get Germplasm ID
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get_germplasm_list()
- Get the Germplasm List of the Current Active Study
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get_hwsd2()
- Get HWSD v2 Soil Data for a Given Location(s)
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get_login_details()
- Login Pop-Up Window
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get_parents()
- Get Direct Parents
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get_pedigree_table()
- Get the Pedigree Table
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get_program_studies()
- Get the List of Trials/Studies/Locations Information of the Current Selected Program
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get_program_trials()
- Internal Function Used to Retrieve the Rough List of Trials
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get_qbms_connection()
- Get the QBMS Connection
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get_study_data()
- Get the Observations Data of the Current Active Study
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get_study_info()
- Get the Details/Metadata of the Current Active Study
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get_terraclimate()
- Get TerraClimate Data for a Given Coordinate(s)
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get_trial_data()
- Get the Observations Data of the Current Active Trial
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get_trial_obs_ontology()
- Get the Traits Ontology/Metadata of the Current Active Trial
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gigwa_get_metadata()
- Get the Metadata of the Current Active GIGWA Run
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gigwa_get_samples()
- Get the Samples List of the Current Active GIGWA Run
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gigwa_get_variants()
- Get Available Variants in the Selected GIGWA Run
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gigwa_list_dbs()
- List GIGWA Databases
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gigwa_list_projects()
- Get the List of All Projects in the Selected GIGWA Database
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gigwa_list_runs()
- Get the List of the Run Names Available in the Selected GIGWA Project
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gigwa_set_db()
- Set the Current Active GIGWA Database by Name
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gigwa_set_project()
- Set the Current Active GIGWA Project
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gigwa_set_run()
- Set the Current Active GIGWA Run
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ini_hwsd2()
- Download and Setup HWSD v2.0 Data Files to Extract their Data Offline
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ini_terraclimate()
- Download TerraClimate netCDF Data Files to Extract their Data Offline
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list_crops()
- Get the List of Supported Crops
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list_locations()
- Get the List of Locations Information of the Current Selected Crop
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list_programs()
- Get the List of Breeding Programs Names
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list_studies()
- Get the List of Studies in the Current Active Trial
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list_trials()
- Get the List of Trials in the Current Active Breeding Program
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login_bms()
- Login to the Server
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login_breedbase()
- Login to the BreedBase Server
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login_gigwa()
- Login to the GIGWA Server
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login_oauth2()
- Login Using OAuth 2.0 Authentication
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rbindlistx()
- Make One Data.Table from a List of Many
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rbindx()
- Combine Data Frames by Row, Filling in Missing Columns
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scan_brapi_endpoints()
- Scan BrAPI Endpoints
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set_crop()
- Set the Current Active Crop
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set_program()
- Set the Current Active Breeding Program
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set_qbms_config()
- Configure BMS Server Settings
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set_qbms_connection()
- Set the QBMS Connection
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set_study()
- Set the Current Active Study
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set_token()
- Set Access Token Response
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set_trial()
- Set the Current Active Trial